Principal Coordinate analysis in R and python
Principal Coordinate Analysis (PCoA) is used in microbiome research for summarizing the compositional differences in the microbial community between samples. In the few papers I read, the analysis was done in R. I found one paper which had used python for doing PCoA. Here I tried to compare, how PCoA works on both platforms. I wanted to test if I can keep on working in Python which I am comfortable with or will I need to get comfortable with R for microbiome analysis.